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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs
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Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy
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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages
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2025 NeLLi Symposium
… of cellular complexity, the tree of life, cultivation of new lineages and the function of candidate lineages in biogeochemical cycles and beyond, as well as microbial symbioses. We aim to foster …
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An Integrated Dataset to Understand Ecosystem Interaction
… and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The … tree, poplars are known for their genetic diversity. They hold economic value as both biofuel feedstock and their role … will be able to conduct a wide variety of analyses that can enhance our understanding of plant-microbe interactions …
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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Hiroshi Otani
… the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly … research activity is focused on developing and implementing new technologies and methodologies that facilitate discovery … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project … with the FICUS program, through which researchers can access multiple DOE facilities with a single proposal. … out there, Drell noted, including the figure 30-million fold: How much JGI’s productivity has increased since 1997. …
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Nikos Kyrpides
… platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters … Prize for Studies in Bacterial Systematics (2012-2014) American Academy of Microbiology Fellow (2014) Academic …
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JGI Launches Latest Strategic Plan
… its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of the Integrative Genomics Building—the new home of the JGI and KBase in the heart of the Lab’s … JGI’s strategic directions,” said Mouncey. “In this way, we can be more responsive to cross-cutting opportunities, align …
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