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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …
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Dan Rokhsar
… the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued …
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Supporting Global Research into Actinomycetes
… special groups of actinobacteria Streptomyces is more than just a funny word. The 500 species described within the … community of researchers studying actinobacteria to share information and data. The filamentous actinobacteria are of … in the JGI Natural Prodcast podcast , where she talks about this community resource. ) “Most people study …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The team has three subgroups: … Check out our organism-agnostic CRISPR gRNA design tool  …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global … having reference  Chaetoceros genomes would provide more information on these ecologically relevant species. Another … the University of Minnesota is interested in learning more about the fungal endophytes of soybean and how they deter …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to familiarize users with the …
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the … events.  Looking ahead, scientists can use this information to assess what specific traits make older … to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. Eisen, J.J.S. …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across eucalypt … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … This work was supported by the Australian Research Council (grant numbers DP140102552, …
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Scaling Up Existing Skill Sets
… for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … Year: 3rd year undergraduate student Mentor: Zhong Wang, Genome Analysis What effect has your summer internship with …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral … Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data …
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