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JGI & KBase at PAG XXVII
… from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by … sequence information to BER-funded activities of plant systems that make use of these resources will present on …
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Tanja Woyke
… products and their derivatives during her Ph.D. in Microbiology at the Eberhard Karls University Tübingen (Germany), … 2018-2023 Highly Cited Researcher, Biology and Biochemistry, top 1%, by Clarivate Analytics … 2020 Elected fellowship in the American Academy of Microbiology 2015 LBNL Women @ The Lab Award 2014 LBNL 2014 …
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Game On: High School Students Drive Everglades Metagenomics Study
… Advanced International Certificate of Education (AICE) Biology class at Florida’s Boca Raton Community High School. … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… of achieving a predictive understanding of biological systems. “If we could model the genome as if it were a … methodologies developed for natural languages to study genomes,” Wang explained.  And since microbial genomes are … for life's processes, making it a fundamental language of biology — and primed for integration with artificial …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… use in number of biotechnological applications. Molecular biology has benefited from heat-stable enzymes derived from … and in this latest report, published in Nature Microbiology , he and his team describe a candidate phylum-level … metagenome assemblies, transcriptomes and single amplified genomes from samples collected from several locations to …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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What Happens Underground Influences Global Nutrient Cycles
… alga  Chlamydomonas reinhardtii , one of the JGI’s Flagship genomes. She and her colleagues have generated a …  under PNNL’s Soil Microbiome SFA, which aims for a systems-level understanding of the soil microbiome and its … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… and an outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope … can turn on the natural product, say clusters or expression systems so that-- BETSY PARKINSON: Exactly. DAN: --you get … in is actually seeing whether we could go into the genomes and predict what the natural product might actually …
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Quantitative DNA Stable Isotope Probing Identifies Active Microorganisms Assimilating Volatile Fatty Acids in Full-Scale Enhanced Biological Phosphorus Removal Processes
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… Internship co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the past decade … and a teaching assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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