Results

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
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Development of a clostridia-based cell-free system for prototyping genetic parts and metabolic pathways
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of infecting … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, … spectrometry workflows for polar and nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
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Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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Virus-associated organosulfur metabolism in human and environmental systems
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A scoutRNA Is Required for Some Type V CRISPR-Cas Systems
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis capability available through the  Community Science … et al.  MAGI: A Method for Metabolite Annotation and Gene Integration . ACS Chem Biol. 2019 Apr 19;14(4):704-714. …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these … factor of 16. The same year, the JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to …
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