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Microbial co-habitation and lateral gene transfer: what transposases can tell us
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Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a scientific journal is the ultimate … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … the algae-associated microbiomes that influence algal diversity and gene expression. Sailing from pole to pole on … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the …
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The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … with ways to measure the reproducibility of results between groups.  Schwartz and Malmstrom came away from the workshop …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … to an exceptional caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in … and reproducibility of my project methods, and I hope that this open-source platform will be utilized by …
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Metabolomics
… identifying the actual molecules present in an environment that influence system behavior.  Through this … functional genome annotation, improves understanding of the role small molecules play in diverse biological … sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform …
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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and …
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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