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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here … and evolutionary factors shaping the assembly of fungal endophytes across land plants and lichens, mentioned her …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm plant host health. … families that were common in fungi that live within plants (endophytes). These include genes that degrade plant cell …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- Maini, Forrest Lefler, Pok Man (Bob) Leung and Huang Li; … a diverse array of projects, including the genomic dynamics of biofuel-producing fungi, the effects of biochar …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly … to rapidly label  E. coli  in order to monitor population dynamics in co-culture. These experiments aim to inform the …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global … Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … meliloti .  S. meliloti is one of the rhizobia, a group of nitrogen-fixing bacteria with symbiotic relationships in …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … In one article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … approaches with the aim of eventually studying virus-host dynamics in nature. In the last few years, mapping the …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to … (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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