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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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Divergent Evolution of Early Terrestrial Fungi Reveals the Evolution of Mucormycosis Pathogenicity Factors
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … from looking at single organisms to applying a broader ecosystem perspective, involving more multidisciplinary teams. …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems …
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Alabama Agricultural & Mechanical University Internship Program
… 2024 was a year of first, including the flagship internship program between … Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more …
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Domain shuffling and the evolution of vertebrates
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SPRUCE-ing Up Science
… his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … in the genome by adding tagged transcription factors to a genomic DNA library. “It’s an innovative way to rapidly …
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JGI@25: The Little Alga That Could
… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … together for what was then called a JGI Jamboree, a sort of genomic hackathon to annotate a genome. (Hear more from on … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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A Journey Through the Evolution of the Mitochondria Internship, A Sequential Read
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