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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis

Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis.

Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes

Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials

Metagenomes and Metagenome-Assembled Genomes from Microbial Communities Fermenting Ultrafiltered Milk Permeate

Mieux connaître les virus présents sur Terre grâce aux métagénomes

Metagenomic stable isotope probing reveals bacteriophage participation in soil carbon cycling

Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning

Size-fractionated metagenomic depth profiles from two sulfidic stations in the Chesapeake Bay.

Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets

Finding the Fermenters

… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … also used the tool to predict possible functions from 733 metagenome-assembled rumen genomes. Finally, they used the … these two isolates. The combined taxonomic and functional annotations were used to predict the final end products from …

EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems

… studies. This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of microbiome dynamics. Together, we will explore …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.