Results

The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in … running 1000s of metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond …
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Association mapping by aerial drone reveals 213 genetic associations for Sorghum bicolor biomass traits under drought
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A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis
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Acquisition of host-derived carbon in biomass of ectomycorrhizal fungus pisolithus microcarpus is correlated to fungal carbon demand and plant defences.
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … Amplification to generate enough DNA to put on a sequencer. As previously mentioned, it’s a method that’s … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office …
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Integrating Experimentation with Data
… $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities … Click to view a downloadable copy of the sponsor prospectus …
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An Addiction Crucial to a Fungus’ Reproduction
… at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …
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