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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … AB in Physics, Princeton University, NJ MS in Theoretical …
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Learning to Look
… Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon … storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels …
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! … fields over the last decade, demonstrated by the production of multiple highly-cited papers that rank in the top 1% by … of a team that  released a reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 … hybrid event, with guests joining onsite at the Integrative Genomics Building at Lawrence Berkeley National Laboratory … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the …
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Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems
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