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DOE Metrics
… Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY 2026 Total   … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. …
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JGI announces 2024 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed … professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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Resolving the Mortierellaceae phylogeny through synthesis of multi-gene phylogenetics and phylogenomics
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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Phylogenetic and metagenomic analysis of Verrucomicrobia in former  agricultural grassland soil
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AlloSHP: deconvoluting single homeologous polymorphism for phylogenetic analysis of allopolyploids
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The JGI sequenced the shrub willows through the  Community Science Program , using long-read sequencing to assemble the …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … regulatory networks as they responded to available carbon sources, which ranged from simple sugars to plant biomass. …
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Rex Malmstrom
… Applications group to operate a similar single-cell genomics pipeline that provides JGI users access to the … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By … New Mexico State University, the Environmental Molecular Sciences Laboratory and the U.S. Department of Energy (DOE) …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River …
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