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JGI announces final round of 2022 Functional Genomics awardees
Below find a list of the final six researchers accepted for 2022. Proposals are accepted year-round; the next deadline …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science … its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time … The study shows that figure is likely closer to a mere 250,000 years — with many key colonization events in the …
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JGIota: Looking Back at Methane-Making Microbes
… bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those …
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Crops as Tough as World Cup Turf
… to be the same species that covered World Cup pitches in 2022.                     …
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Integrating Experimentation with Data
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Busting the Unbreakable Lignin
… in the stomachs of livestock — are actually capable of naturally modifying lignin.  The Impact Traditional methods … Research of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies … (MAO), National Science Foundation grant MCB-1553721 (MAO), Office of Biological and Environmental …
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Supercharging SIP in the Fungal Hyphosphere
… communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope … under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of … Department of Energy operated under Contract No. DE-AC02-05CH11231. …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
User Facility, is supported under Contract No. DE-AC02-05CH11231. JRS is supported by the NASA Astrobiology … grant. RS is supported by NSF grants DEB-1441717, OCE-1335810, and OIA-1826734. …
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iPHoP: A Matchmaker for Phages and their Hosts
… to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the … Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by the U.S. Department of … Department of Energy operated under Contract No. DE-AC02-05CH11231 (SR, APC, SN).  …
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Finding the Fermenters
… interactive browser – contains the phenotypic records of 8,350 organisms along with 4,355 genomes and 13.6 million genes. The results reveal that … National Institute of Food and Agriculture grant 2018-67015-27495, the United States Department of …
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Evolution of a Fungal Gene Expression Regulator
… the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or … DNA base is a methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an important piece of how …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  “We wanted to better … gene expression within circular capture areas roughly 55-microns in diameter — about the width of a human hair. At …
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