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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … resulting comparative framework can inform the efficient production of plant-based biofuels and bioproducts.  Summary …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New … unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating … Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential in Sacramento-San Joaquin Delta, …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of … components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: … use of it, it would change the entire landscape of biomass production and bioproduct engineering. Summary That …
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Extracting the Secrets of Secondary Metabolites
… for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which … in bacteria, making it difficult to identify which pathway corresponds to which metabolite. Finding a vehicle … of CRAGE, the pairing proved to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene …
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Gut Fungi: Unexpected Source of Novel Chemicals
… complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts … O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. Although what …
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What Happens Underground Influences Global Nutrient Cycles
Collaborations for User Science (FICUS) program, two Department of Energy (DOE) Office of Science national … user facilities—the  Environmental Molecular Sciences Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have … and soil interact below the ground, influencing the production of microbial greenhouse gases and volatile …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student … (SCGSR) program awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … For her project, “Microbial Community Structure and Methane Production in California’s Canal System,” she will work with …
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W. Berkeley Kauffman
… for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … to living on a changing planet. In this short audio production, we’ll hear from Karolina Heyduk, an evolutionary … in between.  KAROLINA:  Plants can use a little bit of both pathways. Some plants can appear to be almost entirely C3, …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the world … publications ,” emphasized Markus Göker, who managed the production of genomic DNA at DSMZ for GEBA-Actino and …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … materials, which could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… of significant interest for their potential contributions to a sustainable bioeconomy, including, potentially, methane … that seemed mostly likely to be engaging in methane production to confirm that indeed, they were. The work was … JGI and EMSL. New Methane-Makers Have Alternate Metabolic Pathways And there is something special about these new …
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