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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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How Filamentous Fungi Sense Food
… of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow them to efficiently break down … also being used in the biotechnology industry to produce enzymes, proteins, and other chemicals. Summary Filamentous … this information triggers pathways to determine which enzymes should be deployed in what order to most efficiently …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2T (DSM 21788T), a valuable source of polysaccharide decomposing enzymes
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In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case
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What Happens Underground Influences Global Nutrient Cycles
… colleagues have generated a high-quality, phenotyped mutant library in Chlamy, as the alga is colloquially known by researchers. A missing gene from this mutant library leads to photosynthetic defects, offering insights … FICUS proposal include assessing the distribution of genome-derived functional traits through the soil profile and their …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the …
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High Throughput Phosphoglycolate Phosphatase Activity Assay Using Crude Leaf Extract and Recombinant Enzyme to Determine Kinetic Parameters Km and Vmax Using a Microplate Reader
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Nikos Kyrpides
… comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE … al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …
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Jane Grimwood Named HudsonAlpha Genomics Chair
HudsonAlpha Genome Sequencing Center. Grimwood heads the Library Construction group for the JGI Plant Program . Her …
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