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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The … and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal … represents? A: Some information is available in Help pages. 25.  Annotation tracks such as CAZymes, Peptidases, TF, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration departments. He previously … Deputy of Operations provides oversight and leadership of JGI operations infrastructure, including space and …
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Genome organization and botanical diversity
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Unveiling plasmid diversity in nature
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Expanded genome and proteome reallocation in a novel, robust Bacillus coagulans strain capable of utilizing pentose and hexose sugars
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Terabase-scale metagenome coassembly with MetaHipMer
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ClaMS: A Classifier for Metagenomic Sequences
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Hidden diversity of soil giant viruses
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