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Digging into Microbial Ecosystems Deep Underground
GI users and microbiome researchers Mike Wilkins and his graduate student Kaela Amundson at Colorado State … communities deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re looking at: the role viral infection may play in other …
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Mateus Fiamenghi
Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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JGI on the 2020 Highly Cited Researchers List
Congratulations to the 2020 Highly Cited Researchers at the JGI! They are … production of multiple highly-cited papers that rank in the top 1% by citations for field and year in the Web of … than 6,200 researchers working in 21 fields appear on the list, and those from the JGI are: Kerrie Barry I-Min Chen …
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Eric Olo Ndela
Eric’s research is focusing on the development of new computational approaches to identify and characterize novel Mobile Genetic Elements. Eric’s GitHub …
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the identification and classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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Genome-wide identification of bacterial plant colonization genes
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Arianna Krinos
Arianna is an affiliate research who explores the effect of aquatic protistan taxonomy and genetic diversity on physiology and ecosystem functioning through a combination of transcriptomic, metatranscriptomic, and metagenomic approaches. …
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JGI Accepts 17 Proposals for Community Science Program
Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of … on Alaska’s glacially dominated Copper River Delta. They’re looking at how the microbes in these high latitude wetlands, …
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Defining the core Arabidopsis thaliana root microbiome
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Novel Z-DNA binding domains in giant viruses.
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, …
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Tracking the Origins of Methane-Producing Microbes
Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over … of a novel archaeum from a hot spring that has the genetic machinery to perform hydrogenotrophic methanogenesis … archaeum is a member of the Verstraetearchaeota, and the finding lends credence to the idea that the hydrogenotrophic …
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