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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … produced in environments without oxygen through a process called methanogenesis. Methanogenic microorganisms therefore …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started with 2 interns in the … the Lab. “This project represents part of our long term efforts to contribute towards a diverse workforce and …
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Supercharging SIP in the Fungal Hyphosphere
The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published … did not. This is normally an arduous wet lab process. Typically, after incubating microbial communities with labeled …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
For the first time, a team has comprehensively described … a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … so thoroughly that they lyse the cell — a process called lytic infection. But some viruses are also able to …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a … the ability to break down hardy plant cell walls and therefore hold clues to how humans could do the same on an … of small DNA fragments into larger and coherent pieces called contigs — into genes and even into genomes — from …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … Services Honoree, 2022 Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s …
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A Collaboration to Improve Plant Genome Annotations Across Species
… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … are generated through Community Science Program funding calls. JGI has research funding grants aimed specifically at …
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Trent Northen
… large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … stratified, rainfall dependent, and is mediated by genomically divergent microorganisms. Nature Microbiology 2019 …
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JGI on the 2021 Highly Cited Researchers List
JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … the JGI whose publications rank in the top 1% by citations for field and publication year are: Igor Grigoriev Natalia …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … bean. Though the JGI no longer works on food crops specifically, “[At the JGI] we do use Phaseolus as a test model …
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … with the photobiont transferring part of its photosynthetically fixed carbon to the mycobiont. However, despite a …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … at cellular scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both …
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