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Denoising inferred functional association networks obtained by gene fusion analysis
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The phenylalanine ammonia lyase (PAL) gene family shows a gymnosperm-specific lineage
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Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary
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Restoration and Modification of Magnetosome Biosynthesis by Internal Gene Acquisition in a Magnetotactic Bacterium
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Patterns of pan‐genome occupancy and gene coexpression under water‐deficit in Brachypodium distachyon
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Tuning of Gene Expression in Clostridium phytofermentans Using Synthetic Promoters and CRISPRi
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Diverse fates of ancient horizontal gene transfers in extremophilic red algae
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Metagenomics Reveal Dynamic Coastal Ocean Reservoir of Antibiotic Resistance Genes
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Evolutionary and methodological considerations when interpreting gene presence–absence variation in pangenomes
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral … and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … developing single-nuclei sequencing methods to characterize gene regulation at the level of individual cells across …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… computational biologist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … language of biology — and primed for integration with artificial intelligence tools.  LLMs aren’t just for …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… The Genomics Arms Race Ari Patrinos , Former Director of DOE’s Office of Biological and Environmental Research “There … sectors and it is still seen today as a massive feat in science and collaboration. In closing his presentation, … from his time involved in the project, mostly focused around how to best work together to achieve great success. …
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