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… been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … symbioses. He has worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory network projects supported by the …

… TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …

… by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to sort cells into several small pools, followed by whole genome amplification and shotgun sequencing. The team first … tested the approach on bacterial laboratory models to set a reference for its performance, and then applied it to …

… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Lab). Specific understanding of this symbiosis could offer improvements in multiple directions. On the fungi side, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … lineages in the NCLDV group infect mainly protists and algae, and some of them have genomes in the megabase range. …

… Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature Biotechnol . …

… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate details of … the data it is trained on,” Wang said. “Most models rely on reference genomes to train genome foundation models. … the sheer vastness of microbial diversity is not covered by reference genomes.”  Most of the more than 600 billion base …

… were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic … National Laboratory, dating back to the first complete genome of a poplar tree in 2006. …