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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales
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Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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A second special issue of Standards In Genomic Sciences from the Genomic Standards Consortium
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The JGI Data Portal: Improving User Experience
… it encompasses are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … weren’t able to complete this task. Improving the download process for this group of users offered the promise of an …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of … basic data science skills and portals used by the JGI to process data. These areas had been previously identified as …
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Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … them?    NANCY:  Yeah, okay. Of course. Fungi have a larger genome. The genetics was slower to begin with. So … has a lot to do with, well, the fact that it’s a eukaryotic genome, I guess, and the way DNA is activated. The promoter …
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Cataloging the Microbes that Manage the Health of River Systems
Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … collect samples from across the country to standardize the process. They noted this may be the first publicly … National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols so …
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Tanja Woyke
Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … al. 2022. Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology … et al. 2017. Minimum information about a single amplified genome (MISAG) and a metagenome- assembled genome (MIMAG) of …
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Better Crops With a Pointillist Approach to Plant Genomics
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