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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … an Aspergillus fungal subgroup, section Nigri. Aspergillus fungi play important roles in areas ranging from industrial production to agricultural plant pathogens. Reported in …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC
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Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how …
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Enlarging Windows into Understanding Gene Functions
… array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … what TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five … materials, which could be useful for industrial biofuel production, and multicellular development. “DAP-Seq is the …
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Forming Scientific Connections and Building Community
… experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … “ Development of a multiplex genomic integration system for the selection of genes essential for specialized carbon utilization ” Jesica Calderon : …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for …
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Triggering Morel Fruiting
Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest piece, JGI user Dr. Tan … are economically, culturally, and ecologically important fungi, widely prized as a culinary delicacy, but also …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial …
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