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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that … Prospective users are always welcome to contact one of us about possible proposals if it’s different from what is on …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in the evolution and transition of … the effort that led to the work published in Scientific Reports . Before 2006, Olpidium was one of the many obscure …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, bacteria, … nitrogen metabolisms can be so varied.  As evolution has progressed, organisms have developed metabolisms that …
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Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … Nuevo is, historically, a fishing town and we know little about its coastal microbial ecology. We also know little about where to collect the California Cone Snail  …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with double-stranded DNA … a cysteine protease involved in capsid maturation. Recently reported in  Microbiome , researchers from the US Department …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it … ocean could fix less carbon when infected. Little is known about virus-infected microbial cells that are transformed … viruses control them through infection, but little is known about the impacts of these infections on ecosystem …
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Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17
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Tapping the treasure trove of atypical phages
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Daniel Udwary
Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the JGI, he … "Natural Prodcast" podcast, a "fireside chat"-style podcast about natural products and the science and scientists of …
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Busting the Unbreakable Lignin
The Impact Traditional methods for breaking down biomass use aerobic methods (those using oxygen) to remove lignin and transform the remaining … into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify lignin without oxygen and make …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of … addition, the team says that this experiment outlines a roadmap that is transferable to other systems, expanding the … the realm of bioenergy optimization. Summary Life is all about balance. This study,  recently published in the  …
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