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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors … the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s … tasks we assigned.”       Click here to watch a video about the Biotech Partner summer interns at the JGI. What …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata
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Trent Northen
… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …
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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome …
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Mapping the Earth’s Hidden Fungal Kingdom
… To put this evolutionary timescale in perspective, the genus Aspergillus has been evolving for 82 million years, … and ancient origins, fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among those … with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have …
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Complete genome sequence of Vulcanisaeta distributa type strain (IC-017T)
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … information as well as of important descriptive metadata about each strain. “This has been a very fruitful …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … explained. “This kind of discovery opens new questions about bacterial morphotypes that have never been studied …
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Genome sequence of the Trifolium rueppellianum - nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012
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Remarkably coherent population structure for a dominant Antarctic Chlorobium species
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into the world of …
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