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JGI on the 2021 Highly Cited Researchers List
… Nikos Kyrpides Dan Rokhsar Simon Roux Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of … past year, through programs including the JGI-UC Merced Genomics Internship Program and the DOE Office of Science … (Watch SCGSR fellows Nick Reichart and Ian Rambo talk about their experiences at the JGI.) Igor Grigoriev hosted …
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JGI-UC Merced Interns Share Their 2021 Experiences
… working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and … the goal of inspiring students to embark on a career in genomics and to help foster a diverse future workforce in science. To learn more about each intern’s experience during their internship, …
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University of California, Merced Internship Program
… graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include … Merced students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… peer through the waters and clouds of insects hover just above. Described as a “river of grass” that stretches … to apply the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall … northern Everglades in Palm Beach County, and particularly about the microbes that play roles in the methane cycle. …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … of the plant, that eelgrass began colonizing the oceans  about 3 million years ago. The study shows that figure is … and by a grant to J. Eisen, J.J.S. and J.L.O. from the US Department of Energy Joint Genome Institute Community …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… which microbes are present in a sample, to generate data about which organisms are active, and which microbes are … microbial ecosystems. These communities harbor tens of thousands of different organisms who all consume different … said. Informed by other community-driven standards from the Genomic Standards Consortium, Wilhelm and Simpson assembled …
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JGI Accepts 17 Proposals for Community Science Program
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of 50 letters of intent submitted. Many of the proposals focus on harnessing genomics to developing sustainable resources for biofuels …
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Partners
… and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their … through the Facilities Integrating Collaborations for User Science (FICUS) program.     …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to … other words, some like it hot; some do not. “We can think about the ocean, naively, as a sort of homogeneous medium. … moderate waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… developed to help inform scientists and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of … constraints, etc. of natural environments shape specific genomic signatures that could be used to hypothesize …
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes … equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor …
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You Can Move, But You Can’t Hide
… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, … (https://ror.org/05v3mvq14), are DOE Office of Science User Facilities operated under Contract No. …
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