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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct and model gene … degrade the plant biomass. In order to learn more about these regulatory networks in the model fungus  N. …
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JGI@25: Strengthening Soybean
… the JGI has also helped researchers understand a fungus that threatens these crops as they grow. Asian Soybean Rust is a major problem. Leaves grow discolored and rust … ASR can decimate up to 60-90% of its yield.  (Learn more about the soybean genome sequence and ASR in this JGIota, a …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … ecosystems. A team of researchers described how the viruses repeatedly attempted to infect and destroy the host … Berkeley National Laboratory (Berkeley Lab). To learn more about how microbial populations respond to virus infections, …
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Daniel Udwary
Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to … "Natural Prodcast" podcast, a "fireside chat"-style podcast about natural products and the science and scientists of …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… cow stomach. Rumen – and its microbes – are really a powerhouse. Rumen microbes have the ability to break down hardy … hold clues to how humans could do the same on an industrial scale to produce biofuels . Since one of the … expanded into three other universities. You can learn more about how JGI data supports higher education in this JGIota …
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… in hot springs. Hear how their recent work revealed more about the history of the Chloroflexota phylum and a new way …
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How to Target a Microbial Needle within a Community Haystack
… at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a pipeline to … targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and … traditional shotgun metagenomics approach to learning more about environmental samples starts with researchers first …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational Science Graduate Fellowship …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for recycling. …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those … send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will … center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your …
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