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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their … parallel the genomes and transcriptomes of both partners to better understand lichen. The Impact Lichens are a model for …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science … Sequencing, Synthesis and Metabolomics. Strong internal collaborations with  Science Programs and  Operations …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  … approach to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, and … the direct binding sites of many transcription factors to better understand how nutrients are acquired and carbon is …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … Biology Program .  Representative software includes: gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a … role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and …
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Active Site and Laminarin Binding in Glycoside Hydrolase Family 55*
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 … featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human … challenges and triumphs, and a lot of hard work along the way. In this historical perspective of the Human Genome …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale … bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he … sweeps in natural bacterial populations. ISME Journal 10 (7), 1589 Kashtan, N et al. 2014. Single-cell …
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Scaling Up Existing Skill Sets
… of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … plans to pursue a STEM career? Working at JGI was a great way to gain experience in a non-academic research …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science … Proposals that are looking at multiple areas or multiple ways to answer questions are definitely encouraged. There’s … that might not max out the whole 500 gigabases? Is it better to try to reach that maximum with broader questions …
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Genome-sequenced bacterial collection from sorghum epicuticular wax
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a … quality reference genome sequences could help researchers better understand related genes in more complex plants that …
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