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… summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen Nayfach and  Nikos … published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early 2020, people …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal genomes on the JGI data portal MycoCosm . They looked for genes known to be …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out … Adding Value Beyond Genome Sequences Much of the data had been generated from environmental samples  …

… of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist … provides direction, leadership and oversight for all of the JGI user programs, including the Community Science Program … J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding …

… from Europe, that was sequenced and analyzed by the JGI. The researchers found that S. lacrymans var. lacrymans … Serpula lacrymans on MycoCosm Data portal … Serpula humantioides on MycoCosm Data portal … Datasets … Datasets …

… things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … So fortunately, the secondary metabolite component of the JGI, people are interested in this area. DAN UDWARY: I know … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … team of engineers and scientists builds and operates the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled …

… atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association between the … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: Katsuma Yonehara (Tokyo University) …

… including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. …

… Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …

… samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale of data enabled by these approaches creates a vast resource … Implementation Lead at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User …