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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … Armaleo and colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy …
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Integrating Experimentation with Data
… Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled Laboratory Automation, Data … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities … Click to view a downloadable copy of the sponsor prospectus …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley National Laboratory … to the way many organisms function, they have a sense of why nitrogen metabolisms can be so varied.  As evolution has …
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JGI & KBase at PAG XXVII
… the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will be at Booth 509. Stop by … your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant …
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iPHoP: A Matchmaker for Phages and their Hosts
… With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what … methods. In building this program,  described in Plos Biology , the research team led by scientists at the U.S. …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … Center, JGI staff worked around the clock to generate the sequences of these three chromosomes. In 2004, they … J., Gordon, L., Olsen, A. et al. The DNA sequence and biology of human chromosome 19 . Nature. 428, 529–535 …
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Genome sequence of the palaeopolyploid soybean
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The trajectory of microbial single-cell sequencing
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ClaMS: A Classifier for Metagenomic Sequences
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to produce knock-out …
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JGI announces second round of 2023 New Investigator awardees
… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — … under our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. …
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