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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Understanding the shared genetic toolkit of ancestral and present-day plants The … In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) …
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Gotta Catch 'Em Gall
In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s Computational Biology Program, along with JGI Computational Scientist …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
DNA for genome sequencing was no easy task. The traditional way of collecting them is through a method called Multiple Displacement Amplification, and most genomes that were acquired through it were … it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids and …
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, … Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We noticed a few years ago that …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new … — but the experts we were able to work with on this project to ask questions about structure and function,” … work well for  in vitro  and  in vivo experiments.  In a project led by Blaby, through what is now the  Community …
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Draft Genome Sequence of Methylocapsa palsarum NE2T, an Obligate Methanotroph from Subarctic Soil
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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
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Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis
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