DOE JGI Metagenome Workflow
Results
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
Comparative genomics of the extremophile Cryomyces antarcticus and other psychrophilic Dothideomycetes
MicroSyn: A user friendly tool for detection of microsynteny in a gene family
JGI Portals
Philympics 2021: Prophage Predictions Perplex Programs
MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
JGI Workshop at 2025 Aquatic Sciences Meeting
Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
JGI Snapshot
