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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and … datasets becoming available but also complementary single-cell sorting and sequencing of viruses together with their …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Pinning Down a Piece of Photosynthesis
… and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … structure of the protein related to its function inside the cell, Grosjean used the JGI-developed  guideRNA and Sequence …
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A Collaboration to Improve Plant Genome Annotations Across Species
… of RNA molecules transcribed from all the genes within a cell or tissue at a specific time or under specific … resource like this important to the field of plant genetics/genomics? Avinash: Having a better handle on the gene … handling 18 different species is beyond the capacity of a single lab. Growing different species poses significant …
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UC Merced Interns Reflect on Their JGI Summer Projects
… skills as well as build their network in the field of genomics and scientific research. The topics students worked … language processing techniques to categorize genetic information. Learn more about their work here in a series of … the goal of inspiring students to embark on a career in genomics, and to help foster a diverse future workforce in …
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Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage
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A Novel Freshwater to Marine Evolutionary Transition Revealed within Methylophilaceae Bacteria from the Arctic Ocean
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Community Structure and Microbial Associations in Sediment-Free Methanotrophic Enrichment Cultures from a Marine Methane Seep
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Phylogenetic proximity is a key driver of temporal succession of marine giant viruses in a five-year metagenomic time-series
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Uncovering Novel Genomes from Earth’s Microbiomes
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the study of the microbial communities in the … with a host – with 23,000 MAGs. Modeling A New Path for Metagenomics Researchers Building upon these resources, KBase, a …
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