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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have … a number of notable achievements that showcase our collaborations and capabilities to enable great science that … powerhouse. Rumen microbes have the ability to break down hardy plant cell walls and therefore hold clues to how humans …
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JGIota: Looking Back at Sequencing for Soybeans
… have been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear …
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Hiroshi Otani
… Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. His research activity is focused on developing and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied …
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The Power of One, Amplified
… metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting … were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with respect to … The work conducted by the U.S. Department of Energy Joint Genome …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI … of Texas at Austin professor, “but we really first heard about the JGI synthesis grant during a presentation that … CSP call or through the  “Facilities Integrating Collaborations for User Science” (FICUS) initiative .  Q: …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for … curated microbiome metadata that follows community standards freely available, and enabling large-scale comparative … Biology Knowledgebase ( KBase ) — and aims to extend these collaborations in metadata curation, establishing metadata …
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Tracking the Origins of Methane-Producing Microbes
… Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total … of the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. … From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The Quake lab …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over to the … genes,” Kellogg agreed. “Getting that information is hard. There’s a good reason nobody’s done it; it’s a heck of a …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they … to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a fellow archaeal microbe. … hitchhikers coexist is key for understanding their impact on wider ecosystems, but these symbiotic interactions are …
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A Complex Confection Decoded: Sugarcane Reference Genome
… quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … together a puzzle without necessarily knowing the final image. In contrast, assembling the sugarcane genome was more …
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