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Graduate Students Get Thesis Research Opportunity at the JGI
… at 12 host national laboratories or facilities between 3-12 consecutive months. Their proposed research projects … opportunity with JGI’s experts in computational biology and microbial ecology will allow me to acquire vital … reproducibility of my project methods, and I hope that this open-source platform will be utilized by researchers from a …
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Natural Prodcast Episode 6: Marc Chevrette
… have no extra genes hanging around, they still dedicate 20-30% of their genome to secondary metabolism. So it’s very … she’s really a champion of many different things in microbiology and biology in general. And her efforts first at … some great papers [on] recently – on evolution of biosynthetic gene clusters. And you and I have had some …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … co-founder Axel Visel and UC Merced Quantitative Systems Biology professor Carolin Frank reflected on the past decade … assistant for the UC Merced Quantitative and Systems Biology department.   Jonelle Basso , a JGI research …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… bacterium itself was discovered by Olivier Gros, a marine biology professor at the Université des Antilles in … Silvina Gonzalez-Rizzo, an associate professor of molecular biology at the Université des Antilles and a co-first author … ,” Gonzalez-Rizzo explained. “This kind of discovery opens new questions about bacterial morphotypes that have …
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Making a Lichen Together
… one of the two main branches of fungi); another is a photosynthetic microbe, tucked in the fungus’ tissue. If you’re a … — though perhaps no less dramatic. In lichen, the photosynthetic partner, either a eukaryotic microalga or a … partners. This genomic and transcriptomic analysis has opened the door for more incisive investigations into how …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the coadvisement of … JGI internship led to her co-authorship on a 2017 Plos Biology “The JGI-UC Merced Genomics Distinguished Graduate …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… are two kinds of scientific revolutions,” Ari Patrinos opened with this quote from Thomas Kuhn in his 25th … are numbers out there, Drell noted, including the figure 30-million fold: How much JGI’s productivity has increased … areas of scientific possibility that these accomplishments open up … What the JGI has done for so many years is to, …
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Building Sphagnum Genomic Resources
… carbon is stored in peatlands, which make up nearly 3 percent of the earth’s land surface. In the New … U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and … was also supported by the Austrian Science Fund (FWF, P23117-B17, P25111-B22, P26392-B20, and I1628-B22), the JGI …
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Axel Visel
… Board) , Cell Reports, Nature Structural and Molecular Biology, PLoS Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … EM (2014).  Stop codon reassignments in the wild.   Science 344:909-13 Nord AS, Blow MJ, Attanasio C, Akiyama JA, Holt …
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From Competition to Cooperation
… across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry … root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, … were previously no genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 mycorrhizal …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… team to associate climate adaptations with switchgrass biology. Switchgrass has a large polyploid genome, which …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… other tools that I can use to, um, perform computational biology.  Eric Wu : From the internship I learned to work as …
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