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Comparative transcriptomics uncovers poplar and fungal genetic determinants of ectomycorrhizal compatibility
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … glasses, or a cane, but only Waldo will have all of these features. As described July 22, 2019, in  Nature … found in all inoviruses, and then checking the surrounding genes,” he said. “If these genes are similar in size and …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … after polyploidization,” said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author … event (0.14 Mya) with a maternal  B. stacei parent. The analysis also revealed that these two  B. hybridum types …
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Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid … Also notable, researchers found it is missing 33 genes thought essential for photosynthesis, yet still …
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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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Analysis of the genetic diversity of the soybean rust pathogen Phakopsora pachyrhizi reveals two major evolutionary lineages
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 … by the community regarding the use of JGI data prior to publication by the principal investigators. To resolve these …
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Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi
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Mining Thermophile Photosynthesis Genes: A Synthetic Operon Expressing Chloroflexota Species Reaction Center Genes in Rhodobacter sphaeroides
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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Diversity and Distribution of Sulfur Oxidation-Related Genes in Thioalkalivibrio, a Genus of Chemolithoautotrophic and Haloalkaliphilic Sulfur-Oxidizing Bacteria
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