Results

Metagenomic reconstruction of nitrogen and carbon cycling pathways in forest soil: Influence of different hardwood tree species
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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Newly identified sex chromosomes in the Sphagnum (peat moss) genome alter carbon sequestration and ecosystem dynamics
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The microbial ecology of permafrost
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Microbial Diversity for Biotechnology
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David Goodstein
With a background in experimental and computational surface physics, Dr. … distachyon pan-genome correlates with population structure. Nature Communications 8, 1. Goodstein et al., … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database … through the more than 2 million viral sequences available in IMG/VR v3. …
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Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
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Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … hold economic value as both biofuel feedstock and their role in carbon sequestration. Poplar trees grow quickly in a …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … to capture and characterize viral diversity, understand the role of viruses in natural ecosystems, and functionally …
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