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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Accelerating Metagenomics Discoveries with Deep Learning
Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … organized into multiple interconnected layers. The architecture of these algorithms, inspired by communication …
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PhycoCosm Tutorial
Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among … environmental processes, especially by modifying host cell metabolism and altering cell fitness. As the vast majority … nature. In the last few years, mapping the planet’s viral diversity has advanced drastically, aided by genome assembly …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … that those zinc-binding proteins are important for primary metabolism such as photosynthesis and gene regulation.  Mock … the JGI Algal Program, which explores genomics of algal diversity and biology to support basic science as well as …
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Taxonomic and Metabolic Incongruence in the Ancient Genus Streptomyces
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Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota
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Virus-associated organosulfur metabolism in human and environmental systems
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Metabolic reprogramming by viruses in the sunlit and dark ocean
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