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The trajectory of microbial single-cell sequencing
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ClaMS: A Classifier for Metagenomic Sequences
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome … This research was supported in part by the Allen Distinguished Investigator Program, through The …
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Micro-Scale Applications Group
… that allow us to select specific uncultivated microbes for sequencing based on their level of metabolic activity …
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Picking Up Threads of Cotton Genomics
… field, growers can easily distinguish the cotton species by traits such as flower color, plant height, or fiber … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton … occur in order to drive the research. Oftentimes, these things take not five or eight years, but sometimes 10 or 15 …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… the question, well, how are the microbes being affected by the metals? When metals are introduced, how do they adapt … I mean, they literally may be the key to keeping things going, our agricultural systems could become more … where we can keep improving it, but this rapid shift in population and the environmental implications of it. I mean, …
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Sequencing crop genomes: approaches and applications
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Selection to sequence: opportunities in fungal genomics
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Frameshift detection in prokaryotic genomic sequences.
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Draft Genome Sequences of Switchgrass Diazotrophs
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Tracing the Evolution of Shiitake Mushrooms
… a  genomic look at Lentinula samples from around the world. By complete sequencing of 24 new mushroom genomes, and assembling … genetic diversity between cultivated and wild shiitake populations. The Impact Lentinula mushrooms are white rot … This research was supported by the NSF awards DEB- 1456588 to D.H. and DEB-1442113 to …
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