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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … feedstock with a complex genome with multiple copies of its chromosomes. Switchgrass has deep roots that allow it … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process is ongoing and …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven Alterations of …
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The endosymbiotic box of protective tricks
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. Department of Energy (DOE) … ) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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DRAM for distilling microbial metabolism to automate the curation of microbiome function
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Microbial Ecology on Solar Panels in Berkeley, CA, United States
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Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics
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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
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Habitat‐adapted microbial communities mediate Sphagnum peatmoss resilience to warming
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