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Soil virus offers insight into maintaining microorganisms
… identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, researchers have … of crystalized samples cloned and synthesized by the JGI, scientists have begun the complex process of uncovering the … second only to cellulose.  Chitin is also a common food source for microbes living within soil. So, the chitosanase …
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An Automated Tool for Assessing Virus Data Quality
… assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … limits the ability of researchers to accurately perform functional assessment, host prediction, and phylogenetic …
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Fungus Fuels Tree Growth
… growth of poplar, a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual … effort to understand its influence on the plant, a team of scientists studied what happens to the tree’s physical … as secreted proteins. However,  M. elongata  seems to encourage the plant to have leakier cell walls and weaker …
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Alabama A&M Interns Access An Abundance of Knowledge
… enriching workshops and networked with fellow interns and scientists alike. Want to learn more about their experience? … A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … a JGI intern means not only just watching and observing your mentor, but also being a support for them and …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … DSMZ overall, resulting not only in a valuable sequence resource to complement DSMZ’s vast strain resource, but also …
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Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes
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Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides
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A versatile toolkit for high throughput functional genomics with Trichoderma reesei
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The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions
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Functional genomics gives new insights into the ectomycorrhizal degradation of chitin
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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