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The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … also analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …

The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … also analyze gene expression from published experiments; study DNA methylation, which gives clues to how an organism … Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of …

Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … Colorado State University researchers led a consortium to study river microbiomes. To understand the microbiology of … Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing …

… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a forest floor ecosystem to … able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) …

Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even … temperatures characteristic for polar oceans. In this study, they’ve cracked open the genome of another polar … latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of …

This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered …

By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean … scientist at the JGI and Molecular Foundry, and the study’s senior author. In other proteins, two histidine …

Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a … and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight …

This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches …

After studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology at the Eberhard Karls … information about a single amplified genome (MISAG) and a metagenome- assembled genome (MIMAG) of bacteria and …