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Refining the Process of Identifying Algae Biotechnology Candidates
… effort published in Communications Biology , a team involving researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The Scenedesmus genome was sequenced and assembled at the JGI. Sara Calhoun in Igor Grigoriev’s team at the JGI led …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was established to work on the … genome sequence of green millet ( Setaria viridis ). The team of researchers at the Danforth Plant Science Center …
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Trichoderma sp. strain AM6 whole-genome guided untargeted metabolomics: Terpenoid backbone synthesis and modulation of VOCs in tea (Camellia sinensis L.)
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … sorting and non-standard molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the resources as a user facility. The Metagenome Program team provided guidance and encouragement to submit a …
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How Filamentous Fungi Sense Food
… in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … life. By leveraging massive user-generated datasets at the JGI and other publicly available data, GenomeOcean employs … structures and functions. Wang worked with the MetaHipMer team with Berkeley Lab’s Computing Sciences Area to develop …
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Honey Bee Gut Microbiota Divvy Up Dinner
… for what biochemical processes? Now, an international team of researchers has identified the major metabolic roles … the  Proceedings of the National Academy of Sciences . The team focused on the dominant bacterial clades shared between … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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An Addiction Crucial to a Fungus’ Reproduction
… group, about which little is known. The Cornell team cultivated and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) …
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Ancient Algae Reveal Secrets of Plant Evolution
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The algal genomes sequences are available on the JGI’s  PhycoCosm portal. …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … factor – before or after flowering. For the study, the team grew two sorghum varieties: one that tolerates better …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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