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Project Management Office
… The JGI Project Management Office carries out a number of … to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and … Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina del Rio Metagenomics     …
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes … Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we …
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Analyze Data
… The JGI supports the entire data life cycle — from experimental … research community.   We have two key priorities:  The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The … both haplotypes, meaning it separately represents the sets of chromosomes inherited from each parent. It also has … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted …
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Fungus Fuels Tree Growth
… to its intimate associations with endophytes — a group whose effects on plants are still not well understood — … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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A Sorghum Pangenome Opens More Doors to Discovery
… Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. Lovell was a senior author on this work … for future analysis and discovery. “We're building the data sets that are needed to build the algorithms of the future. … States Agency for International Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, …
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Extracting the Secrets of Secondary Metabolites
… produced in response to hardship or competition. They make up the foundation for a slew of vital products in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… well as material that can be converted to energy, are made up heavily of sphagnum mosses.  New research identifies sex … Sphagnum, a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the overwhelming majority of the ground cover in …
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Tour the IGB
… zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… that turns scientific presumption on its head and opens up a new avenue to explore for efficient biofuel production. …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring users … amenable to statistical analysis. To meet these needs, the JGI deploys state-of-the-art sequencers and platforms … in strain engineering and functional assays and supporting new methodologies to enhance the integration of …
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