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Learning to Look
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … a JGI research scientist in the  Environmental Genomics group . Training the Search Tool Inoviruses are stealth agents … through more than 70,000 microbial and metagenome datasets, ultimately identifying more than 10,000 inovirus-like …
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Marine Microbe Contains Multitudes
… bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …
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A Plant Root Atlas for Tracking Developmental Trajectories
… and combining the information with previously published datasets. The work was  recently published in the journal  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …
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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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Restoring wetlands on intensive agricultural lands modifies nitrogen cycling microbial communities and reduces N2O production potential
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community … Tips: Contact us with your questions (jgi-jira+pmosup[email protected]) Carefully read our proposal call description … this type of data set. Having a co-PI with complementary skills can show reviewers the team is really able to take …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… for example, crop and ornamental seeds sold for the upper Midwest are often very different than those bred for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … with a proposal from UT-Austin’s Tom Juenger, a longtime JGI collaborator and a senior author on this study. The use …
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Disclaimer
… by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of … any statement of authorship are reproduced on all copies. JGI is not responsible for the contents of any off-site …
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Supercharging SIP in the Fungal Hyphosphere
… microbial DNA is manually separated into a few different groups based on its density — DNA containing isotopes is … and sequencing steps. Ultimately, researchers found their updated strategy required one-sixth the labor of the manual … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Fungal Friends or Foes in Plant Roots
… by graduate student Fantin Mesny in Stéphane Hacquard’s group at the Max Planck Institute for Plant Breeding Research … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Fungi in plant roots: friends, enemies or frenemies? … Datasets … From our partners … Behind the Paper …
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David Goodstein
… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to the Human Genome Project, he began …
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