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Leadership
… This group is responsible for institutional strategic planning, talent management, and convening of … the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Ben Bowen
… developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and … Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical Engineering Post-doctoral positions – Arizona State University, Bioengineering & Metabolic Biology …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA …
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Microbes in thawing permafrost: the unknown variable in the climate change equation
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Mitochondrial ATP generation is more proteome efficient than glycolysis
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Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in length, while the previous version had an average of 25,000 bp pieces. That’s the difference between assembling a …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus … a coloring book featuring polar bears in winter scenes that came with crayons in various shades of white. To … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Fishing for Novel Cellulose Degraders
… for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular movement, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … are present in any given ecosystem—particularly those that are in low abundances—and their functional roles in …
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The Big Deal About Short Plants
… Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … to engineer microbial communities. One day, these phages could boost plant-microbe interactions, nutrient cycling, or … score. The result is a genus-level host prediction tool that draws on the strengths of multiple virus-host …
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing environments better? We could unlock new innovations to drive more productive food, medicine, and … of the plant tree of life. One project aims to change that. …
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