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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … plays an important role in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common … seemingly humble common bean has fueled further research into disease tolerance in crops, drought- and …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment … “hook” of fluorescence-activated cell sorting to sort cells into several small pools, followed by whole genome … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … also contains hundreds of genes uniquely associated with carbon dioxide capture and the generation of biomass, making … C. reinhardtii on PhycoCosm … C. zofingiensis on Phytozome …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP DNA … Ian Blaby on Google Scholar Grosjean et al ., A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria Nature Communications …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … highlights abundances of gene annotations that provide insights into the nutrients that are being used and cycled … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early … lineages found there and elsewhere provide researchers with insights into the evolution of life on Earth. For decades, longtime … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … and genes that lead to increased lipid production. These insights into  Y. lipolytica biology and lipid metabolism furthers … This work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … I wanted to start, maybe just by asking you how did you get into the field of natural products?   NANCY: Yeah, that’s a … was finished with the Peace Corps, I decided I wanted to go into international agriculture. I had really changed my …
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … with the humans and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of … microbes, researchers have been able to gain further insights about how microbes have adapted to thrive in polar …
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