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Building Sphagnum Genomic Resources
… a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s … Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond to increases in …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … — skills that matter increasingly as the climate warms. However, these are complicated interactions to untangle. … of soil RNA — we can access — ‘What are they doing? How do they interact?’” said senior author Francis Martin, a …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to … we also hoped to use this unique opportunity to quantify how transitions to higher ploidy could be generating these … also hoped that this would more broadly allow us to assess how ploidy variation alters genomic diversity, fitness, and …
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their ever-changing environments …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), … assembled from metagenomes. He also demonstrates briefly how to leverage novel capabilities of IMG/VR to browse and search through the more than 2 million viral sequences …
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the … project, I wanted to incorporate that CSP, but also look at how viruses might be influencing the methane cycling within … wetlands.” A chapter of Rambo’s research focuses on how viruses influence carbon cycling in coastal mangroves. …
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Emiley Eloe-Fadrosh
… 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Collaborative (NMDC). Prospective users with questions on how to partner with the Metagenome Science Program on their …
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Back to the Future! A Sorghum Story
… You might know sorghum as an edible grain. But there are some sorghum varieties, grown on marginal land with little water, which were developed specifically to … John Mullet, a biologist at Texas A&M University, tells us how sorghum’s historical — and literal — roots could play a …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together … Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In … depends on lakewater samples — so this episode is a look at how researchers get these specialized snapshots of a …
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