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JGI@25: The Human Genome Project, or the JGI’s Origin Story
Han, C., Gordon, L. et al. The sequence and analysis of duplication-rich human chromosome 16 . Nature. 432, 988–994 …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
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JGI@25: From Life at the Extremes to Editing Genomes
… “a revolutionary impact on the life sciences.” Building upon CRISPR-Cas9 work, the Doudna lab at UC Berkeley seeks … they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated Microbial … that can target single-stranded DNA. Such proteins have been adapted for therapeutic application development by …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems … is a key step. For decades, though, many viruses have been somewhat invisible to the sampling experiments probing …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… that they provide the “funding and administrative/faculty support so that they can deliver these programs to our … position with the Plant and Microbe Interaction group at Oak Ridge National Laboratory, he has started a new … the Lab as well.  One of the 2015 program alumnus Cristhian Gutierrez discussed how his time as an undergraduate intern …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than previously … one of the largest carbon sinks in the ocean — occupying just 0.2% of the ocean floor, these meadows are … is unique in that there are not many species able to occupy the regions where eelgrass flourishes. The plant can …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… they sharply delineated into two big geographical groups: those in colder, polar waters, and those in warmer, … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing …
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The Power of One, Amplified
… and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly sorted, whole genome amplified, … to hundreds of samples, while single cell approaches have been typically used as a complement to isolate sequencing, … was similar across the dominant lineages, each microbial group displayed vastly different recombination profiles. This …
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The More the Merrier: Making the Case for Plant Pan-genomes
… three or more genome copies from additional parents or duplication, also known as “polyploidy,” is common among … genomes and many  B. distachyon genomes. This builds upon a previously made  B. distachyon pan-genome. A … that polyploid evolution is occurring slower than had been expected. “Although every case is probably going to be …
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