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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
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50-year fire legacy regulates soil microbial carbon and nutrient cycling responses to new fire
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Webinar: SIP technologies at EMSL and JGI
… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools … has to go into the plant, out through the roots, into the soil, and then picked up by the rhizosphere, then that takes … than a plant that’s beginning to go through senescence. 9. Q: With EMSL’s real-time trace gas monitoring, can this …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Pinpointing the processes happening on and in forest soil also better enriches models of global carbon and … ground and what escapes to the atmosphere in the form of greenhouse gases (e.g., carbon dioxide, methane, and nitrous … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from …
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Dispatches From JGI Interns
… real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, computational tools, and big data.  …
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JGI@25: From Life at the Extremes to Editing Genomes
… to seven. Doudna was recognized for her work on CRISPR-Cas9, technology described by the Nobel Foundation as having “a … development by Mammoth Biosciences, one of several companies that Doudna has founded. Doudna’s interest in … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … study from a JGI-led team uncovered giant viruses in the soil for the first time. The current study applied a … the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this group expanded …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Leahy and the JGI’s Rekha Seshadri in this JGIota, a Genome Insider podcast minisode. To date it is the single largest … capable of knocking down human RNA the way that CRISPR-Cas9 systems snip DNA. This could eventually lead to …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set out to …
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Yasuo Yoshikuni
… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating … improve crop yield, and developing a platform for building composite materials. Before joining the JGI, Dr. Yoshikuni …
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Game On: High School Students Drive Everglades Metagenomics Study
… in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the … email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) … Education (E4) community-building workshop at the  2019 Association for Environmental Studies and Sciences (AESS) …
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