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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … al . In both studies, however, Olpidium was unexpectedly grouped with non-flagellated terrestrial fungi, but not with … early terrestrial fungi. Flagellum loss is believed to be closely associated with the invasion of land by fungi. It …
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JGI@25: From Life at the Extremes to Editing Genomes
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … Congratulations to Jennifer Doudna of the University of California (UC), Berkeley and Lawrence Berkeley National …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic … & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able … Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we …
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Evolution of a Fungal Gene Expression Regulator
… the DNA bases themselves can also be modified. The best-known example of a modified DNA base is a methylation of the … ways to protect poplar and other crops being considered for bioenergy feedstock development. Summary With the aim of … Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the US Department of …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By … Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a …
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Stepping on the Gas to a Circular Economy: Accelerating Development of Carbon-Negative Chemical Production from Gas Fermentation
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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
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Data Ecosystem
… to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development of tools and infrastructure for microbiome data science, and the development of new …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … state-of-the-art data processing and analysis pipelines for the interpretation of microbiome omics data Developing …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
The  National Ecological Observatory Network (NEON) is a network of field research sites designed to … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … . Q:  How can I get that NEON Biorepository Letter of Support ahead of filing a proposal? A:  If you have a good …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of … of 2020, selected from 118 nominees. The selection process for AAM Fellows is based on their records of scientific … eminent leaders in the field of microbiology and are relied upon for authoritative advice and insight on critical issues …
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