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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … interactions? Do generalist viruses run rampant, capable of infecting different host species? Or, do they tend to … the mat’s viruses specialize to single hosts, and instead of lysing them, which appears to be prevalent in marine …
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Building Sphagnum Genomic Resources
Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … which make up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston … cycling is a carbon flux regulator since sulfate-reducing microbes prevent methane production by routing the carbon …
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iPHoP: A Matchmaker for Phages and their Hosts
… to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … the roles viruses and their host microbes play in nutrient cycles. … This work was supported by the U.S. Department of …
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JGI Announces 2025 New Investigator Portfolio
You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and … the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere microbiomes, and the …
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How Maize Makes An Antibiotic Cocktail
Maize produces a family of compounds that protects it against infections — using … enzymes. The Science Maize ( Zea mays ) produces a plethora of antibiotics called zealexins. Even though scientists have … produced in every corn variety and protect maize by fending off fungal and microbial infections. Scientists had assumed …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially … kind of plant metabolism. This metabolism, called crassulacean acid metabolism, or CAM — that’s C-A-M, for short — …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the …
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Blake Simmons
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect … neither the United States Government nor the University of California nor any of their employees, makes any …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using … Hammack AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev Micro 22, 63. …
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Picking Up Threads of Cotton Genomics
… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and importance in the fabric of our lives. In the United States, cotton production …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and …   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions of years … evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by …
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