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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… dataset gives researchers a new foundation for studying how fungi produce and manage energy at the cellular level. … trees built from mitochondrial and nuclear genomes showed strong agreement across the kingdom, confirming that … fungal metabolic traits from genomic data to understand how biological systems produce and manage energy. By …
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Mining Metagenomes for Cas Proteins
… disease. Finally, gene editing is being used to understand how a person’s genetic makeup predisposes them to, or … and Nanohaloarchaea. This work represents an excellent showcase of the unique capabilities provided from the IMG/M … Science Foundation Graduate Research Fellowships and the Howard Hughes Medical Institute. Support was also provided …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… users will enable us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI …
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Finding the Fermenters
… Most organisms use oxygen to convert food into energy. However, in environments with little or no oxygen, life had … of these microbes. The Impact This study illustrates how the research community brings together the data …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… function and activity of phytoplankton genes and looking at how communities of these microalgae interact, researchers … analysis as well as laboratory culture experiments showed that those zinc-binding proteins are important for … data from the JGI. With multiple threads of evidence showing that zinc has allowed polar algae to inhabit their …
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Evolution of a Fungal Gene Expression Regulator
… or 5mC. In many organisms, 5mC is an important piece of how they regulate their genomes, but is not well understood …
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Introducing New Members of the JGI User Executive Committee
… but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently …
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JGI@25: The Little Alga That Could
… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost … loss of this protein is associated with cancers. “So, it shows that Chlamydomonas has this related protein that’s also …
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Boosting Small Molecule Production in Super “Soup”
… the small molecules glycerol and itaconic acid to see how the cell-free system allowed them to increase the … in the absence of cell walls. If we can continue to learn how to focus the carbon flux, we can avoid transport …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… Newly developed chemiluminescent biosensors shed light on how bacteria function and colonize diverse environments. The …
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Alabama A&M Interns Access An Abundance of Knowledge
… CRISPR Cas9 knockout mutants to observe and investigate how transporter proteins regulate the production of root …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Jonelle Basso, Heejung Cho Project:  Characterizing how resident phages shape their host phenotype Graduate …
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